[INFO] fetching crate bdb 0.0.1...
[INFO] building bdb-0.0.1 against master#ff34b919075f35a1787659e9c448a34b06bab8de for issue-85264
[INFO] extracting crate bdb 0.0.1 into /workspace/builds/worker-11/source
[INFO] validating manifest of crates.io crate bdb 0.0.1 on toolchain ff34b919075f35a1787659e9c448a34b06bab8de
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bdb 0.0.1
[INFO] finished tweaking crates.io crate bdb 0.0.1
[INFO] tweaked toml for crates.io crate bdb 0.0.1 written to /workspace/builds/worker-11/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5ea335352701503fc30a60807846ff3831693f6f96fc57324b8f08e03d5eb898
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "5ea335352701503fc30a60807846ff3831693f6f96fc57324b8f08e03d5eb898", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5ea335352701503fc30a60807846ff3831693f6f96fc57324b8f08e03d5eb898", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5ea335352701503fc30a60807846ff3831693f6f96fc57324b8f08e03d5eb898", kill_on_drop: false }`
[INFO] [stdout] 5ea335352701503fc30a60807846ff3831693f6f96fc57324b8f08e03d5eb898
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 930752ff1c098898f628e99fe6b4e5dbf7e99ebaf1e0b872082ddedd41036631
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "930752ff1c098898f628e99fe6b4e5dbf7e99ebaf1e0b872082ddedd41036631", kill_on_drop: false }`
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[INFO] [stderr]    Compiling bdb v0.0.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]  --> src/util/alias.rs:9:26
[INFO] [stdout]   |
[INFO] [stdout] 9 | pub type ErrorType = Box<StdError>;
[INFO] [stdout]   |                          ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout]   = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]   = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/util/error.rs:168:32
[INFO] [stdout]     |
[INFO] [stdout] 168 |     fn cause(&self) -> Option<&StdError> {
[INFO] [stdout]     |                                ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]     |
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]     = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             self.ms_level != 0 &&
[INFO] [stdout] 14 | |             !self.filter.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             self.ms_level != 0 &&
[INFO] [stdout] 13 |             !self.filter.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/valid.rs:9:9
[INFO] [stdout]    |
[INFO] [stdout] 9  | /         (
[INFO] [stdout] 10 | |             self.num != 0 &&
[INFO] [stdout] 11 | |             self.rt >= 0.0 &&
[INFO] [stdout] 12 | |             !self.peaks.is_empty() &&
[INFO] [stdout] ...  |
[INFO] [stdout] 30 | |             )
[INFO] [stdout] 31 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 9  |         self.num != 0 &&
[INFO] [stdout] 10 |             self.rt >= 0.0 &&
[INFO] [stdout] 11 |             !self.peaks.is_empty() &&
[INFO] [stdout] 12 |             // If the MS level is 2 or higher, check the parents are set.
[INFO] [stdout] 13 |             (
[INFO] [stdout] 14 |                 (
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.description.is_empty()
[INFO] [stdout] 14 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.description.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/valid.rs:10:9
[INFO] [stdout]    |
[INFO] [stdout] 10 | /         (
[INFO] [stdout] 11 | |             !self.seq_id.is_empty() &&
[INFO] [stdout] 12 | |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 13 | |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 14 | |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 15 | |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout] 16 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 10 |         !self.seq_id.is_empty() &&
[INFO] [stdout] 11 |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 12 |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 13 |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 14 |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.proteome.is_empty() &&
[INFO] [stdout] 14 | |             !self.taxonomy.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.proteome.is_empty() &&
[INFO] [stdout] 13 |             !self.taxonomy.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/valid.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             // Do not try to validate the Organism
[INFO] [stdout] 13 | |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 14 | |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] ...  |
[INFO] [stdout] 33 | |             )
[INFO] [stdout] 34 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         // Do not try to validate the Organism
[INFO] [stdout] 12 |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 13 |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] 14 |             self.sequence_version > 0 &&
[INFO] [stdout] 15 |             self.protein_evidence < ProteinEvidence::Unknown &&
[INFO] [stdout] 16 |             self.mass > 0 &&
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]  --> src/util/writer.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use ref_slice::ref_slice;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]   --> src/util/writer.rs:34:35
[INFO] [stdout]    |
[INFO] [stdout] 34 |             self.writer.write_all(ref_slice(&self.delimiter))?;
[INFO] [stdout]    |                                   ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:112:45
[INFO] [stdout]     |
[INFO] [stdout] 112 |         write!(f, "UniProt error: {}", self.description())
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:144:43
[INFO] [stdout]     |
[INFO] [stdout] 144 |             ErrorKind::Io(ref err) => err.description(),
[INFO] [stdout]     |                                           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:145:45
[INFO] [stdout]     |
[INFO] [stdout] 145 |             ErrorKind::Utf8(ref err) => err.description(),
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:146:49
[INFO] [stdout]     |
[INFO] [stdout] 146 |             ErrorKind::FromUtf8(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:147:49
[INFO] [stdout]     |
[INFO] [stdout] 147 |             ErrorKind::ParseInt(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:151:42
[INFO] [stdout]     |
[INFO] [stdout] 151 |                 XmlError::Io(ref e) => e.description(),
[INFO] [stdout]     |                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:152:44
[INFO] [stdout]     |
[INFO] [stdout] 152 |                 XmlError::Utf8(ref e) => e.description(),
[INFO] [stdout]     |                                            ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 17 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 26s
[INFO] running `Command { std: "docker" "inspect" "930752ff1c098898f628e99fe6b4e5dbf7e99ebaf1e0b872082ddedd41036631", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "930752ff1c098898f628e99fe6b4e5dbf7e99ebaf1e0b872082ddedd41036631", kill_on_drop: false }`
[INFO] [stdout] 930752ff1c098898f628e99fe6b4e5dbf7e99ebaf1e0b872082ddedd41036631
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+ff34b919075f35a1787659e9c448a34b06bab8de" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 20395cf9f6605753a265f9a83b7444d14dcc57654e79a6d39e143254831b30ff
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "20395cf9f6605753a265f9a83b7444d14dcc57654e79a6d39e143254831b30ff", kill_on_drop: false }`
[INFO] [stderr]    Compiling assert_approx_eq v1.1.0
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]  --> src/util/alias.rs:9:26
[INFO] [stdout]   |
[INFO] [stdout] 9 | pub type ErrorType = Box<StdError>;
[INFO] [stdout]   |                          ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout]   = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]   = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/util/error.rs:168:32
[INFO] [stdout]     |
[INFO] [stdout] 168 |     fn cause(&self) -> Option<&StdError> {
[INFO] [stdout]     |                                ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]     |
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]     = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             self.ms_level != 0 &&
[INFO] [stdout] 14 | |             !self.filter.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             self.ms_level != 0 &&
[INFO] [stdout] 13 |             !self.filter.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/valid.rs:9:9
[INFO] [stdout]    |
[INFO] [stdout] 9  | /         (
[INFO] [stdout] 10 | |             self.num != 0 &&
[INFO] [stdout] 11 | |             self.rt >= 0.0 &&
[INFO] [stdout] 12 | |             !self.peaks.is_empty() &&
[INFO] [stdout] ...  |
[INFO] [stdout] 30 | |             )
[INFO] [stdout] 31 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 9  |         self.num != 0 &&
[INFO] [stdout] 10 |             self.rt >= 0.0 &&
[INFO] [stdout] 11 |             !self.peaks.is_empty() &&
[INFO] [stdout] 12 |             // If the MS level is 2 or higher, check the parents are set.
[INFO] [stdout] 13 |             (
[INFO] [stdout] 14 |                 (
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.description.is_empty()
[INFO] [stdout] 14 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.description.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/valid.rs:10:9
[INFO] [stdout]    |
[INFO] [stdout] 10 | /         (
[INFO] [stdout] 11 | |             !self.seq_id.is_empty() &&
[INFO] [stdout] 12 | |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 13 | |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 14 | |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 15 | |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout] 16 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 10 |         !self.seq_id.is_empty() &&
[INFO] [stdout] 11 |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 12 |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 13 |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 14 |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.proteome.is_empty() &&
[INFO] [stdout] 14 | |             !self.taxonomy.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.proteome.is_empty() &&
[INFO] [stdout] 13 |             !self.taxonomy.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/valid.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             // Do not try to validate the Organism
[INFO] [stdout] 13 | |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 14 | |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] ...  |
[INFO] [stdout] 33 | |             )
[INFO] [stdout] 34 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         // Do not try to validate the Organism
[INFO] [stdout] 12 |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 13 |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] 14 |             self.sequence_version > 0 &&
[INFO] [stdout] 15 |             self.protein_evidence < ProteinEvidence::Unknown &&
[INFO] [stdout] 16 |             self.mass > 0 &&
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]  --> src/util/writer.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use ref_slice::ref_slice;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]   --> src/util/writer.rs:34:35
[INFO] [stdout]    |
[INFO] [stdout] 34 |             self.writer.write_all(ref_slice(&self.delimiter))?;
[INFO] [stdout]    |                                   ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:112:45
[INFO] [stdout]     |
[INFO] [stdout] 112 |         write!(f, "UniProt error: {}", self.description())
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:144:43
[INFO] [stdout]     |
[INFO] [stdout] 144 |             ErrorKind::Io(ref err) => err.description(),
[INFO] [stdout]     |                                           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:145:45
[INFO] [stdout]     |
[INFO] [stdout] 145 |             ErrorKind::Utf8(ref err) => err.description(),
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:146:49
[INFO] [stdout]     |
[INFO] [stdout] 146 |             ErrorKind::FromUtf8(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:147:49
[INFO] [stdout]     |
[INFO] [stdout] 147 |             ErrorKind::ParseInt(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:151:42
[INFO] [stdout]     |
[INFO] [stdout] 151 |                 XmlError::Io(ref e) => e.description(),
[INFO] [stdout]     |                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:152:44
[INFO] [stdout]     |
[INFO] [stdout] 152 |                 XmlError::Utf8(ref e) => e.description(),
[INFO] [stdout]     |                                            ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 17 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling bdb v0.0.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]  --> src/util/alias.rs:9:26
[INFO] [stdout]   |
[INFO] [stdout] 9 | pub type ErrorType = Box<StdError>;
[INFO] [stdout]   |                          ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout]   = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]   = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]    --> src/util/error.rs:168:32
[INFO] [stdout]     |
[INFO] [stdout] 168 |     fn cause(&self) -> Option<&StdError> {
[INFO] [stdout]     |                                ^^^^^^^^ help: use `dyn`: `dyn StdError`
[INFO] [stdout]     |
[INFO] [stdout]     = warning: this was previously accepted by the compiler but is being phased out; it will become a hard error in the 2021 edition!
[INFO] [stdout]     = note: for more information, see issue #80165 <https://github.com/rust-lang/rust/issues/80165>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             self.ms_level != 0 &&
[INFO] [stdout] 14 | |             !self.filter.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             self.ms_level != 0 &&
[INFO] [stdout] 13 |             !self.filter.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/mass_spectra/valid.rs:9:9
[INFO] [stdout]    |
[INFO] [stdout] 9  | /         (
[INFO] [stdout] 10 | |             self.num != 0 &&
[INFO] [stdout] 11 | |             self.rt >= 0.0 &&
[INFO] [stdout] 12 | |             !self.peaks.is_empty() &&
[INFO] [stdout] ...  |
[INFO] [stdout] 30 | |             )
[INFO] [stdout] 31 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 9  |         self.num != 0 &&
[INFO] [stdout] 10 |             self.rt >= 0.0 &&
[INFO] [stdout] 11 |             !self.peaks.is_empty() &&
[INFO] [stdout] 12 |             // If the MS level is 2 or higher, check the parents are set.
[INFO] [stdout] 13 |             (
[INFO] [stdout] 14 |                 (
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.description.is_empty()
[INFO] [stdout] 14 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.description.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/sra/valid.rs:10:9
[INFO] [stdout]    |
[INFO] [stdout] 10 | /         (
[INFO] [stdout] 11 | |             !self.seq_id.is_empty() &&
[INFO] [stdout] 12 | |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 13 | |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 14 | |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 15 | |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout] 16 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 10 |         !self.seq_id.is_empty() &&
[INFO] [stdout] 11 |             self.length as usize == self.sequence.len() &&
[INFO] [stdout] 12 |             self.length as usize == self.quality.len() &&
[INFO] [stdout] 13 |             NucleotideRegex::validate().is_match(&self.sequence) &&
[INFO] [stdout] 14 |             SequenceQualityRegex::validate().is_match(&self.quality)
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/complete.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             self.is_valid() &&
[INFO] [stdout] 13 | |             !self.proteome.is_empty() &&
[INFO] [stdout] 14 | |             !self.taxonomy.is_empty()
[INFO] [stdout] 15 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         self.is_valid() &&
[INFO] [stdout] 12 |             !self.proteome.is_empty() &&
[INFO] [stdout] 13 |             !self.taxonomy.is_empty()
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around block return value
[INFO] [stdout]   --> src/db/uniprot/valid.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 11 | /         (
[INFO] [stdout] 12 | |             // Do not try to validate the Organism
[INFO] [stdout] 13 | |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 14 | |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] ...  |
[INFO] [stdout] 33 | |             )
[INFO] [stdout] 34 | |         )
[INFO] [stdout]    | |_________^
[INFO] [stdout]    |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 11 |         // Do not try to validate the Organism
[INFO] [stdout] 12 |             // With virus names being non-standard, it is impossible
[INFO] [stdout] 13 |             // with an NFA, and extremely time complex otherwise.
[INFO] [stdout] 14 |             self.sequence_version > 0 &&
[INFO] [stdout] 15 |             self.protein_evidence < ProteinEvidence::Unknown &&
[INFO] [stdout] 16 |             self.mass > 0 &&
[INFO] [stdout]  ...
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]  --> src/util/writer.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use ref_slice::ref_slice;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `ref_slice::ref_slice`: Similar method was added to std and stabilized in rust 1.28.0. Use `core::slice::from_ref` instead.
[INFO] [stdout]   --> src/util/writer.rs:34:35
[INFO] [stdout]    |
[INFO] [stdout] 34 |             self.writer.write_all(ref_slice(&self.delimiter))?;
[INFO] [stdout]    |                                   ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:112:45
[INFO] [stdout]     |
[INFO] [stdout] 112 |         write!(f, "UniProt error: {}", self.description())
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:144:43
[INFO] [stdout]     |
[INFO] [stdout] 144 |             ErrorKind::Io(ref err) => err.description(),
[INFO] [stdout]     |                                           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:145:45
[INFO] [stdout]     |
[INFO] [stdout] 145 |             ErrorKind::Utf8(ref err) => err.description(),
[INFO] [stdout]     |                                             ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:146:49
[INFO] [stdout]     |
[INFO] [stdout] 146 |             ErrorKind::FromUtf8(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:147:49
[INFO] [stdout]     |
[INFO] [stdout] 147 |             ErrorKind::ParseInt(ref err) => err.description(),
[INFO] [stdout]     |                                                 ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:151:42
[INFO] [stdout]     |
[INFO] [stdout] 151 |                 XmlError::Io(ref e) => e.description(),
[INFO] [stdout]     |                                          ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]    --> src/util/error.rs:152:44
[INFO] [stdout]     |
[INFO] [stdout] 152 |                 XmlError::Utf8(ref e) => e.description(),
[INFO] [stdout]     |                                            ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `core::str::<impl str>::trim_right`: superseded by `trim_end`
[INFO] [stdout]    --> src/io/uniprot.rs:167:37
[INFO] [stdout]     |
[INFO] [stdout] 167 |         assert_eq!(expected, actual.trim_right());
[INFO] [stdout]     |                                     ^^^^^^^^^^ help: replace the use of the deprecated associated function: `trim_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 18 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 10.12s
[INFO] running `Command { std: "docker" "inspect" "20395cf9f6605753a265f9a83b7444d14dcc57654e79a6d39e143254831b30ff", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "20395cf9f6605753a265f9a83b7444d14dcc57654e79a6d39e143254831b30ff", kill_on_drop: false }`
[INFO] [stdout] 20395cf9f6605753a265f9a83b7444d14dcc57654e79a6d39e143254831b30ff
